removed whitespace

The style flag/option needed to be changed. Also removed problamatic line from config.

.clang-format

@@ -0,0 +1,48 @@
+# ---
+Language: Cpp
+# The Based on style flag causes nothing to work.
+#BasedOnStyle: None
+AlignTrailingComments: true
+AlignArrayOfStructures: Left 
+
+AlignConsecutiveAssignments:
+  Enabled: true
+  AcrossEmptyLines: true
+  AcrossComments: false
+
+AlignConsecutiveBitFields:
+  Enabled: true
+  AcrossEmptyLines: true
+  AcrossComments: false
+
+AlignConsecutiveDeclarations:
+  Enabled: true
+  AcrossEmptyLines: true
+  AcrossComments: false
+
+AlignConsecutiveShortCaseStatements:
+  Enabled: true
+  AcrossEmptyLines: true
+  AcrossComments: true
+  AlignCaseColons: false
+
+AllowAllArgumentsOnNextLine: true
+AllowAllConstructorInitializersOnNextLine: true
+AllowAllParametersOfDeclarationOnNextLine: true
+AllowShortBlocksOnASingleLine: true
+AllowShortCaseLabelsOnASingleLine: false
+AllowShortEnumsOnASingleLine: false
+AllowShortFunctionsOnASingleLine: false
+AllowShortIfStatementsOnASingleLine: true
+
+BreakBeforeBraces: Allman
+ColumnLimit: 0
+IndentWidth: 4
+KeepEmptyLinesAtTheStartOfBlocks: false
+ObjCSpaceAfterProperty: true
+ObjCSpaceBeforeProtocolList: true
+PointerBindsToType: false
+SpacesBeforeTrailingComments: 1
+TabWidth: 8
+UseTab: Never
+

otto.sh

@@ -10,6 +10,23 @@ TEMPLATE_FILES=".template_files"
 MODULE_DIR="${TEMPLATE_FILES}/modules"
 
 
+format_source_code () {
+    #Get a list of all C files
+    source_c_files=$(find ./src -name '*.c')
+    for f in $source_c_files; do
+        clang-format -i -style=file $f
+    done
+
+    #Get a list of all H files
+    source_h_files=$(find ./src -name '*.h')
+    for f in $source_h_files; do
+        clang-format -i -style=file $f
+    done
+
+    echo "Applying Formating standard!"
+}
+
+
 add_compile_commands () {
     if [ -f ./compile_commands.json ]; then
         echo "compile_commands.json already exists!\n"
@@ -172,6 +189,7 @@ build_main () {
 }
 
 run_c_tests () {
+    format_source_code 
     clear_cmake_cache
     cmake -DUNIT_TESTING=ON  -DCMAKE_VERBOSE_MAKEFILE=${CMAKE_VERBOSE} ../
     make AllTests && ./tests/AllTests

src/main.c

@@ -5,4 +5,3 @@ int main(int argc, char **argv)
     printf("Hello!\n");
     return 0;
 }
-